PDB entry 1bd3

View 1bd3 on RCSB PDB site
Description: structure of the apo uracil phosphoribosyltransferase, 2 mutant c128v
Class: transferase
Keywords: transferase, glycosyltransferase, uprtase
Deposited on 1998-05-12, released 1999-05-18
The last revision prior to the SCOPe 2.08 freeze date was dated 2021-03-10, with a file datestamp of 2021-03-05.
Experiment type: XRAY
Resolution: 1.93 Å
R-factor: N/A
AEROSPACI score: 0.36 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: uracil phosphoribosyltransferase
    Species: Toxoplasma gondii [TaxId:5811]
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q26998 (Start-242)
      • conflict (82)
      • engineered (126)
      • conflict (155)
    Domains in SCOPe 2.08: d1bd3a_
  • Chain 'B':
    Compound: uracil phosphoribosyltransferase
    Species: Toxoplasma gondii [TaxId:5811]
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q26998 (Start-242)
      • conflict (82)
      • engineered (126)
      • conflict (155)
    Domains in SCOPe 2.08: d1bd3b_
  • Chain 'C':
    Compound: uracil phosphoribosyltransferase
    Species: Toxoplasma gondii [TaxId:5811]
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q26998 (Start-242)
      • conflict (82)
      • engineered (126)
      • conflict (155)
    Domains in SCOPe 2.08: d1bd3c_
  • Chain 'D':
    Compound: uracil phosphoribosyltransferase
    Species: Toxoplasma gondii [TaxId:5811]
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q26998 (Start-242)
      • conflict (82)
      • engineered (126)
      • conflict (155)
    Domains in SCOPe 2.08: d1bd3d_
  • Heterogens: PO4, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >1bd3A (A:)
aqvpasgkllvdprystndqeesilqdiitrfpnvvlmkqtaqlrammtiirdketpkee
fvfyadrlirllieealnelpfqkkevttpldvsyhgvsfyskicgvsivragesmesgl
ravcrgvrigkiliqrdettaepkliyeklpadirerwvmlldpmcatagsvckaievll
rlgvkeeriifvnilaapqgiervfkeypkvrmvtaavdiclnsryyivpgigdfgdryf
gtm

    Sequence, based on observed residues (ATOM records): (download) 
    >1bd3A (A:)
qeesilqdiitrfpnvvlmkqtaqlrammtiirdketpkeefvfyadrlirllieealne
lpfqkkevttpldvsyhgvsfyskicgvsivragesmesglravcrgvrigkiliqrdet
taepkliyeklpadirerwvmlldpmcatagsvckaievllrlgvkeeriifvnilaapq
giervfkeypkvrmvtaavdiclnsryyivpgigdfgdryfgtm

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >1bd3B (B:)
aqvpasgkllvdprystndqeesilqdiitrfpnvvlmkqtaqlrammtiirdketpkee
fvfyadrlirllieealnelpfqkkevttpldvsyhgvsfyskicgvsivragesmesgl
ravcrgvrigkiliqrdettaepkliyeklpadirerwvmlldpmcatagsvckaievll
rlgvkeeriifvnilaapqgiervfkeypkvrmvtaavdiclnsryyivpgigdfgdryf
gtm

    Sequence, based on observed residues (ATOM records): (download) 
    >1bd3B (B:)
qeesilqdiitrfpnvvlmkqtaqlrammtiirdketpkeefvfyadrlirllieealne
lpfqkkevttpldvsyhgvsfyskicgvsivragesmesglravcrgvrigkiliqrdet
taepkliyeklpadirerwvmlldpmcatagsvckaievllrlgvkeeriifvnilaapq
giervfkeypkvrmvtaavdiclnsryyivpgigdfgdryfgtm

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >1bd3C (C:)
aqvpasgkllvdprystndqeesilqdiitrfpnvvlmkqtaqlrammtiirdketpkee
fvfyadrlirllieealnelpfqkkevttpldvsyhgvsfyskicgvsivragesmesgl
ravcrgvrigkiliqrdettaepkliyeklpadirerwvmlldpmcatagsvckaievll
rlgvkeeriifvnilaapqgiervfkeypkvrmvtaavdiclnsryyivpgigdfgdryf
gtm

    Sequence, based on observed residues (ATOM records): (download) 
    >1bd3C (C:)
qeesilqdiitrfpnvvlmkqtaqlrammtiirdketpkeefvfyadrlirllieealne
lpfqkkevttpldvsyhgvsfyskicgvsivragesmesglravcrgvrigkiliqrdet
taepkliyeklpadirerwvmlldpmcatagsvckaievllrlgvkeeriifvnilaapq
giervfkeypkvrmvtaavdiclnsryyivpgigdfgdryfgtm

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >1bd3D (D:)
aqvpasgkllvdprystndqeesilqdiitrfpnvvlmkqtaqlrammtiirdketpkee
fvfyadrlirllieealnelpfqkkevttpldvsyhgvsfyskicgvsivragesmesgl
ravcrgvrigkiliqrdettaepkliyeklpadirerwvmlldpmcatagsvckaievll
rlgvkeeriifvnilaapqgiervfkeypkvrmvtaavdiclnsryyivpgigdfgdryf
gtm

    Sequence, based on observed residues (ATOM records): (download) 
    >1bd3D (D:)
qeesilqdiitrfpnvvlmkqtaqlrammtiirdketpkeefvfyadrlirllieealne
lpfqkkevttpldvsyhgvsfyskicgvsivragesmesglravcrgvrigkiliqrdet
taepkliyeklpadirerwvmlldpmcatagsvckaievllrlgvkeeriifvnilaapq
giervfkeypkvrmvtaavdiclnsryyivpgigdfgdryfgtm