PDB entry 1bbr

View 1bbr on RCSB PDB site
Description: the structure of residues 7-16 of the a alpha chain of human fibrinogen bound to bovine thrombin at 2.3 angstroms resolution
Class: serine protease
Keywords: serine protease
Deposited on 1992-04-27, released 1994-01-31
The last revision prior to the SCOPe 2.08 freeze date was dated 2009-02-24, with a file datestamp of 2009-02-03.
Experiment type: XRAY
Resolution: 2.3 Å
R-factor: 0.167
AEROSPACI score: 0.34 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'E':
    Compound: epsilon-thrombin
    Species: Bos taurus [TaxId:9913]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d1bbr.1
  • Chain 'F':
    Compound: fibrinogen alpha/alpha-e chain precursor
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
  • Chain 'G':
    Compound: fibrinogen alpha/alpha-e chain precursor
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
  • Chain 'H':
    Compound: epsilon-thrombin
    Species: Bos taurus [TaxId:9913]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d1bbr.1
  • Chain 'I':
    Compound: fibrinogen alpha/alpha-e chain precursor
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
  • Chain 'J':
    Compound: epsilon-thrombin
    Species: Bos taurus [TaxId:9913]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d1bbr.2
  • Chain 'K':
    Compound: epsilon-thrombin
    Species: Bos taurus [TaxId:9913]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d1bbr.2
  • Chain 'L':
    Compound: epsilon-thrombin
    Species: Bos taurus [TaxId:9913]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d1bbr.1
  • Chain 'M':
    Compound: epsilon-thrombin
    Species: Bos taurus [TaxId:9913]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d1bbr.3
  • Chain 'N':
    Compound: epsilon-thrombin
    Species: Bos taurus [TaxId:9913]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d1bbr.3
  • Heterogens: HOH

PDB Chain Sequences:

  • Chain 'E':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >1bbrE (E:)
svaevqpsvlqvvnlplverpvckastriritdnmfcagykpgegkrgdacegdsggpfv
mkspynnrwyqmgivswgegcdrdgkygfythvfrlkkwiqkvidrlgs

  • Chain 'F':
    No sequence available.

  • Chain 'G':
    No sequence available.

  • Chain 'H':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >1bbrH (H:)
ivegqdaevglspwqvmlfrkspqellcgaslisdrwvltaahcllyppwdknftvddll
vrigkhsrtryerkvekismldkiyihprynwkenldrdiallklkrpielsdyihpvcl
pdkqtaakllhagfkgrvtgwgnrretwtt

  • Chain 'I':
    No sequence available.

  • Chain 'J':
    Sequence, based on SEQRES records: (download) 
    >1bbrJ (J:)
tsedhfqpffnektfgageadcglrplfekkqvqdqtekelfesyiegr

    Sequence, based on observed residues (ATOM records): (download) 
    >1bbrJ (J:)
tfgageadcglrplfekkqvqdqtekelfesyiegr

  • Chain 'K':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >1bbrK (K:)
ivegqdaevglspwqvmlfrkspqellcgaslisdrwvltaahcllyppwdknftvddll
vrigkhsrtryerkvekismldkiyihprynwkenldrdiallklkrpielsdyihpvcl
pdkqtaakllhagfkgrvtgwgnrretwttsvaevqpsvlqvvnlplverpvckastrir
itdnmfcagykpgegkrgdacegdsggpfvmkspynnrwyqmgivswgegcdrdgkygfy
thvfrlkkwiqkvidrlgs

  • Chain 'L':
    Sequence, based on SEQRES records: (download) 
    >1bbrL (L:)
tsedhfqpffnektfgageadcglrplfekkqvqdqtekelfesyiegr

    Sequence, based on observed residues (ATOM records): (download) 
    >1bbrL (L:)
tfgageadcglrplfekkqvqdqtekelfesyiegr

  • Chain 'M':
    Sequence, based on SEQRES records: (download) 
    >1bbrM (M:)
tsedhfqpffnektfgageadcglrplfekkqvqdqtekelfesyiegr

    Sequence, based on observed residues (ATOM records): (download) 
    >1bbrM (M:)
tfgageadcglrplfekkqvqdqtekelfesyiegr

  • Chain 'N':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >1bbrN (N:)
ivegqdaevglspwqvmlfrkspqellcgaslisdrwvltaahcllyppwdknftvddll
vrigkhsrtryerkvekismldkiyihprynwkenldrdiallklkrpielsdyihpvcl
pdkqtaakllhagfkgrvtgwgnrretwttsvaevqpsvlqvvnlplverpvckastrir
itdnmfcagykpgegkrgdacegdsggpfvmkspynnrwyqmgivswgegcdrdgkygfy
thvfrlkkwiqkvidrlgs