PDB entry 1b8d

View 1b8d on RCSB PDB site
Description: crystal structure of a phycourobilin-containing phycoerythrin
Class: photosynthesis
Keywords: light-harvesting complex, red algae, phycobiliprotein, photosynthesis
Deposited on 1999-01-29, released 1999-02-18
The last revision prior to the SCOPe 2.05 freeze date was dated 2009-02-24, with a file datestamp of 2009-03-01.
Experiment type: XRAY
Resolution: 1.9 Å
R-factor: 0.175
AEROSPACI score: 0.49 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: protein (rhodophytan phycoerythrin (alpha chain))
    Species: Griffithsia monilis [TaxId:42003]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.05: d1b8da_
  • Chain 'B':
    Compound: protein (rhodophytan phycoerythrin (beta chain))
    Species: Griffithsia monilis [TaxId:42003]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.05: d1b8db_
  • Chain 'G':
    Compound: protein (rhodophytan phycoerythrin (gamma chain))
    Species: Griffithsia monilis [TaxId:42003]
    Database cross-references and differences (RAF-indexed):
    • PDB 1B8D (0-5)
  • Chain 'K':
    Compound: protein (rhodophytan phycoerythrin (alpha chain))
    Species: Griffithsia monilis [TaxId:42003]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.05: d1b8dk_
  • Chain 'L':
    Compound: protein (rhodophytan phycoerythrin (beta chain))
    Species: Griffithsia monilis [TaxId:42003]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.05: d1b8dl_
  • Heterogens: PEB, PUB, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >1b8dA (A:)
mksvitttisaadaagrfpsssdlesiqgniqraaarleaaqklsgnheavvkeagdacf
akysylknageagdspekinkcyrdidhymrlinyslvvggtgpvdewgiagsrevyral
nlpgsayiaaftftrdrlcvprdmssqagveftsaldyvinslc

  • Chain 'B':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >1b8dB (B:)
mldafsrvvvtsdakaayvggsdlqslksfindgnkrldavnyivsnascivsdavsgmi
cenpgliapggncytnrrmaaclrdgeiilryvsyallagdssvlddrclnglketyial
gvptasssravsimkatatafitntasgrkvevaagdcqalqaeaasyfdkvgssid

  • Chain 'G':
    No sequence available.

  • Chain 'K':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >1b8dK (K:)
mksvitttisaadaagrfpsssdlesiqgniqraaarleaaqklsgnheavvkeagdacf
akysylknageagdspekinkcyrdidhymrlinyslvvggtgpvdewgiagsrevyral
nlpgsayiaaftftrdrlcvprdmssqagveftsaldyvinslc

  • Chain 'L':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >1b8dL (L:)
mldafsrvvvtsdakaayvggsdlqslksfindgnkrldavnyivsnascivsdavsgmi
cenpgliapggncytnrrmaaclrdgeiilryvsyallagdssvlddrclnglketyial
gvptasssravsimkatatafitntasgrkvevaagdcqalqaeaasyfdkvgssid