PDB entry 1b8a

View 1b8a on RCSB PDB site
Description: aspartyl-tRNA synthetase
Class: ligase
Keywords: synthetase, tRNA ligase,, ligase
Deposited on 1999-01-27, released 1999-02-02
The last revision prior to the SCOPe 2.02 freeze date was dated 2011-07-13, with a file datestamp of 2011-05-08.
Experiment type: XRAY
Resolution: 1.9 Å
R-factor: 0.168
AEROSPACI score: 0.51 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: protein (aspartyl-tRNA synthetase)
    Species: Thermococcus kodakarensis [TaxId:69014]
    Gene: ASPS
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q52428
      • conflict (121)
      • conflict (188)
      • conflict (195)
      • conflict (412)
    Domains in SCOPe 2.02: d1b8aa1, d1b8aa2
  • Chain 'B':
    Compound: protein (aspartyl-tRNA synthetase)
    Species: Thermococcus kodakarensis [TaxId:69014]
    Gene: ASPS
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q52428 (0-437)
      • conflict (121)
      • conflict (188)
      • conflict (195)
      • conflict (412)
    Domains in SCOPe 2.02: d1b8ab1, d1b8ab2
  • Heterogens: MN, ATP, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >1b8aA (A:)
myrthysseiteelngqkvkvagwvwevkdlggikflwirdrdgivqitapkkkvdpelf
klipklrsedvvavegvvnftpkaklgfeilpekivvlnraetplpldptgkvkaeldtr
lnnrfmdlrrpevmaifkirssvfkavrdffhengfieihtpkiiatateggtelfpmky
feedaflaespqlykeimmasgldrvyeiapifraeehnttrhlneawsidsemafiede
eevmsflerlvahainyvrehnakeldilnfeleepklpfprvsydkaleilgdlgkeip
wgedidtegerllgkymmenenaplyflyqypseakpfyimkydnkpeicrafdleyrgv
eissggqrehrhdilveqikekglnpesfefylkafrygmpphggfglgaerlikqmldl
pnirevilfprdrrrltp

  • Chain 'B':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >1b8aB (B:)
myrthysseiteelngqkvkvagwvwevkdlggikflwirdrdgivqitapkkkvdpelf
klipklrsedvvavegvvnftpkaklgfeilpekivvlnraetplpldptgkvkaeldtr
lnnrfmdlrrpevmaifkirssvfkavrdffhengfieihtpkiiatateggtelfpmky
feedaflaespqlykeimmasgldrvyeiapifraeehnttrhlneawsidsemafiede
eevmsflerlvahainyvrehnakeldilnfeleepklpfprvsydkaleilgdlgkeip
wgedidtegerllgkymmenenaplyflyqypseakpfyimkydnkpeicrafdleyrgv
eissggqrehrhdilveqikekglnpesfefylkafrygmpphggfglgaerlikqmldl
pnirevilfprdrrrltp