PDB entry 1am9

View 1am9 on RCSB PDB site
Description: human srebp-1a bound to ldl receptor promoter
Class: transcription/DNA
Keywords: sterol regulatory element binding protein, basic-helix-loop-helix-leucine zipper, srebp, transcription factor, complex (transcription regulation-DNA), transcription-DNA complex
Deposited on 1997-06-25, released 1998-07-01
The last revision prior to the SCOPe 2.08 freeze date was dated 2021-02-03, with a file datestamp of 2021-01-29.
Experiment type: XRAY
Resolution: 2.3 Å
R-factor: N/A
AEROSPACI score: 0.32 (click here for full SPACI score report)

Chains and heterogens:

• Chain 'A':
  Compound: protein (sterol regulatory element binding protein 1a)
  Species: Homo sapiens [TaxId:9606]
  Database cross-references and differences (RAF-indexed):
  • Uniprot P36956 (0-End)
  Domains in SCOPe 2.08: d1am9a_
• Chain 'B':
  Compound: protein (sterol regulatory element binding protein 1a)
  Species: Homo sapiens [TaxId:9606]
  Database cross-references and differences (RAF-indexed):
  • Uniprot P36956
  Domains in SCOPe 2.08: d1am9b_
• Chain 'C':
  Compound: protein (sterol regulatory element binding protein 1a)
  Species: Homo sapiens [TaxId:9606]
  Database cross-references and differences (RAF-indexed):
  • Uniprot P36956 (0-81)
  Domains in SCOPe 2.08: d1am9c_
• Chain 'D':
  Compound: protein (sterol regulatory element binding protein 1a)
  Species: Homo sapiens [TaxId:9606]
  Database cross-references and differences (RAF-indexed):
  • Uniprot P36956 (0-End)
  Domains in SCOPe 2.08: d1am9d_
• Chain 'E':
  Compound: DNA (5'-d(*tp*tp*gp*cp*ap*gp*tp*gp*gp*gp*gp*tp*gp*ap*tp*cp*t )-3')
  
• Chain 'F':
  Compound: DNA (5'-d(*cp*ap*tp*gp*ap*gp*ap*tp*cp*ap*cp*cp*cp*cp*ap*cp*t p*gp*cp*ap*a)-3')
  
• Chain 'G':
  Compound: DNA (5'-d(*tp*tp*gp*cp*ap*gp*tp*gp*gp*gp*gp*tp*gp*ap*tp*cp*t )-3')
  
• Chain 'H':
  Compound: DNA (5'-d(*cp*ap*tp*gp*ap*gp*ap*tp*cp*ap*cp*cp*cp*cp*ap*cp*t p*gp*cp*ap*a)-3')
  
• Heterogens: MG, HOH

PDB Chain Sequences:

• Chain 'A':
  Sequence, based on SEQRES records: (download)
  

  >1am9A (A:)
  qsrgekrtahnaiekryrssindkiielkdlvvgteaklnksavlrkaidyirflqhsnq
  klkqenlslrtavhkskslkdl
  

  
  Sequence, based on observed residues (ATOM records): (download)
  

  >1am9A (A:)
  qsrgekrtahnaiekryrssindkiielkdlvvgteaklnksavlrkaidyirflqhsnq
  klkqenlslrtavhkskslk
  

  
  
• Chain 'B':
  Sequence, based on SEQRES records: (download)
  

  >1am9B (B:)
  qsrgekrtahnaiekryrssindkiielkdlvvgteaklnksavlrkaidyirflqhsnq
  klkqenlslrtavhkskslkdl
  

  
  Sequence, based on observed residues (ATOM records): (download)
  

  >1am9B (B:)
  srgekrtahnaiekryrssindkiielkdlvvgteaklnksavlrkaidyirflqhsnqk
  lkqenlslrtavhks
  

  
  
• Chain 'C':
  Sequence; same for both SEQRES and ATOM records: (download)
  

  >1am9C (C:)
  qsrgekrtahnaiekryrssindkiielkdlvvgteaklnksavlrkaidyirflqhsnq
  klkqenlslrtavhkskslkdl
  

  
  
• Chain 'D':
  Sequence, based on SEQRES records: (download)
  

  >1am9D (D:)
  qsrgekrtahnaiekryrssindkiielkdlvvgteaklnksavlrkaidyirflqhsnq
  klkqenlslrtavhkskslkdl
  

  
  Sequence, based on observed residues (ATOM records): (download)
  

  >1am9D (D:)
  qsrgekrtahnaiekryrssindkiielkdlvvgteaklnksavlrkaidyirflqhsnq
  klkqenlslrtavhks
  

  
  
• Chain 'E':
  No sequence available.
  
  
• Chain 'F':
  No sequence available.
  
  
• Chain 'G':
  No sequence available.
  
  
• Chain 'H':
  No sequence available.