PDB entry 1aif
View 1aif on RCSB PDB site
Description: anti-idiotypic fab 409.5.3 (igg2a) fab from mouse
Class: immunoglobulin
Keywords: immunoglobulin, c region, v region
Deposited on
1994-11-14, released
1997-02-01
The last revision prior to the SCOPe 2.08 freeze date was dated
2009-02-24, with a file datestamp of
2009-02-03.
Experiment type: XRAY
Resolution: 2.9 Å
R-factor: 0.22
AEROSPACI score: 0.15
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: anti-idiotypic fab 409.5.3 (igg2a) fab (light chain)
Species: Mus musculus [TaxId:10090]
Database cross-references and differences (RAF-indexed):
- Uniprot P01837 (0-214)
- conflict (0)
- conflict (2)
- conflict (9)
- conflict (11)
- conflict (17)
- conflict (20)
- conflict (24-25)
- insertion (27-28)
- conflict (30)
- conflict (32-33)
- conflict (41)
- conflict (46)
- conflict (50)
- conflict (53)
- conflict (60)
- conflict (92)
- conflict (94)
- conflict (113)
Domains in SCOPe 2.08: d1aifa1, d1aifa2 - Chain 'B':
Compound: anti-idiotypic fab 409.5.3 (igg2a) fab (heavy chain)
Species: Mus musculus [TaxId:10090]
Database cross-references and differences (RAF-indexed):
- GB AAB34981 (0-217)
- conflict (4)
- conflict (19)
- conflict (27)
- conflict (29-30)
- conflict (34)
- conflict (42)
- conflict (47)
- conflict (52-53)
- insertion (55)
- conflict (57-58)
- conflict (68)
- conflict (70)
- conflict (79-80)
- conflict (86)
- insertion (98)
- conflict (99)
- conflict (101-103)
- conflict (106-108)
- conflict (115)
- conflict (120)
- insertion (195)
Domains in SCOPe 2.08: d1aifb1, d1aifb2 - Chain 'H':
Compound: anti-idiotypic fab 409.5.3 (igg2a) fab (heavy chain)
Species: Mus musculus [TaxId:10090]
Database cross-references and differences (RAF-indexed):
- GB AAB34981 (0-217)
- conflict (4)
- conflict (19)
- conflict (27)
- conflict (29-30)
- conflict (34)
- conflict (42)
- conflict (47)
- conflict (52-53)
- insertion (55)
- conflict (57-58)
- conflict (68)
- conflict (70)
- conflict (79-80)
- conflict (86)
- insertion (98)
- conflict (99)
- conflict (101-103)
- conflict (106-108)
- conflict (115)
- conflict (120)
- insertion (195)
Domains in SCOPe 2.08: d1aifh1, d1aifh2 - Chain 'L':
Compound: anti-idiotypic fab 409.5.3 (igg2a) fab (light chain)
Species: Mus musculus [TaxId:10090]
Database cross-references and differences (RAF-indexed):
- Uniprot P01837 (0-214)
- conflict (0)
- conflict (2)
- conflict (9)
- conflict (11)
- conflict (17)
- conflict (20)
- conflict (24-25)
- insertion (27-28)
- conflict (30)
- conflict (32-33)
- conflict (41)
- conflict (46)
- conflict (50)
- conflict (53)
- conflict (60)
- conflict (92)
- conflict (94)
- conflict (113)
Domains in SCOPe 2.08: d1aifl1, d1aifl2
PDB Chain Sequences:
- Chain 'A':
Sequence; same for both SEQRES and ATOM records: (download)
>1aifA (A:)
diqltqspafmaaspgekvtitcsvsssisssnlhwyqqksetspkpwiygtsnlasgvp
vrfsgsgsgtsysltissmeaedaatyycqqwnsypytfgggtkleikradaaptvsifp
psseqltsggasvvcflnnfypkdinvkwkidgserqngvlnswtdqdskdstysmsstl
tltkdeyerhnsytceathktstspivksfnrnec
- Chain 'B':
Sequence; same for both SEQRES and ATOM records: (download)
>1aifB (B:)
evklqesggglvqpggsmklscvasgftfnnywmswvrqspekglewvaeirlnsdnfat
hyaesvkgkfiisrddsksrlylqmnslraedtgiyycvlrplfyyavdywgqgtsvtvs
sakttppsvyplapgsaaqtnsmvtlgclvkgyfpepvtvtwnsgslssgvhtfpavlqs
dlytlsssvtvpstwrpsetvtcnvahpasstkvdkki
- Chain 'H':
Sequence; same for both SEQRES and ATOM records: (download)
>1aifH (H:)
evklqesggglvqpggsmklscvasgftfnnywmswvrqspekglewvaeirlnsdnfat
hyaesvkgkfiisrddsksrlylqmnslraedtgiyycvlrplfyyavdywgqgtsvtvs
sakttppsvyplapgsaaqtnsmvtlgclvkgyfpepvtvtwnsgslssgvhtfpavlqs
dlytlsssvtvpstwrpsetvtcnvahpasstkvdkki
- Chain 'L':
Sequence; same for both SEQRES and ATOM records: (download)
>1aifL (L:)
diqltqspafmaaspgekvtitcsvsssisssnlhwyqqksetspkpwiygtsnlasgvp
vrfsgsgsgtsysltissmeaedaatyycqqwnsypytfgggtkleikradaaptvsifp
psseqltsggasvvcflnnfypkdinvkwkidgserqngvlnswtdqdskdstysmsstl
tltkdeyerhnsytceathktstspivksfnrnec