PDB entry 1age
View 1age on RCSB PDB site
Description: antagonist hiv-1 gag peptides induce structural changes in hla b8-hiv-1 gag peptide (ggkkkyrl-7r mutation)
Class: histocompatibility complex
Keywords: hla b8, hiv, MHC class I, histocompatibility complex
Deposited on
1997-03-24, released
1997-06-16
The last revision prior to the SCOP 1.75 freeze date was dated
2003-04-01, with a file datestamp of
2007-06-04.
Experiment type: XRAY
Resolution: 2.3 Å
R-factor: 0.171
AEROSPACI score: 0.46
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: b*0801
Species: HOMO SAPIENS
Gene: GAG
Database cross-references and differences (RAF-indexed):
Domains in SCOP 1.75: d1agea1, d1agea2 - Chain 'B':
Compound: beta-2 microglobulin
Species: HOMO SAPIENS
Gene: GAG
Database cross-references and differences (RAF-indexed):
Domains in SCOP 1.75: d1ageb_ - Chain 'C':
Compound: hiv-1 gag peptide (ggkkkyrl - 7r mutation)
Species: Human immunodeficiency virus 1
- Heterogens: HOH
PDB Chain Sequences:
- Chain 'A':
Sequence; same for both SEQRES and ATOM records: (download)
>1ageA (A:)
gshsmryfdtamsrpgrgeprfisvgyvddtqfvrfdsdaaspreeprapwieqegpeyw
drntqifktntqtdreslrnlrgyynqseagshtlqsmygcdvgpdgrllrghnqyaydg
kdyialnedlrswtaadtaaqitqrkweaarvaeqdraylegtcvewlrrylengkdtle
radppkthvthhpisdheatlrcwalgfypaeitltwqrdgedqtqdtelvetrpagdrt
fqkwaavvvpsgeeqrytchvqheglpkpltlrwep
- Chain 'B':
Sequence; same for both SEQRES and ATOM records: (download)
>1ageB (B:)
iqrtpkiqvysrhpaengksnflncyvsgfhpsdievdllkngeriekvehsdlsfskdw
sfyllyyteftptekdeyacrvnhvtlsqpkivkwdrdm
- Chain 'C':
No sequence available.