PDB entry 1afd

View 1afd on RCSB PDB site
Description: structural basis of galactose recognition in c-type animal lectins
Class: lectin
Keywords: c-type lectin, calcium-binding protein
Deposited on 1995-11-03, released 1996-04-03
The last revision prior to the SCOPe 2.07 freeze date was dated 2009-02-24, with a file datestamp of 2009-03-01.
Experiment type: XRAY
Resolution: 2 Å
R-factor: 0.234
AEROSPACI score: 0.4 (click here for full SPACI score report)

Chains and heterogens:

  • Chain '1':
    Compound: mannose-binding protein-a
    Species: Rattus norvegicus [TaxId:10116]
    Database cross-references and differences (RAF-indexed):
    • Uniprot P19999 (0-153)
      • engineered (112)
      • engineered (114)
      • engineered (116-118)
      • insertion (119-123)
    Domains in SCOPe 2.07: d1afd11, d1afd12
  • Chain '2':
    Compound: mannose-binding protein-a
    Species: Rattus norvegicus [TaxId:10116]
    Database cross-references and differences (RAF-indexed):
    • Uniprot P19999 (0-153)
      • engineered (112)
      • engineered (114)
      • engineered (116-118)
      • insertion (119-123)
    Domains in SCOPe 2.07: d1afd21, d1afd22
  • Chain '3':
    Compound: mannose-binding protein-a
    Species: Rattus norvegicus [TaxId:10116]
    Database cross-references and differences (RAF-indexed):
    • Uniprot P19999 (0-153)
      • engineered (112)
      • engineered (114)
      • engineered (116-118)
      • insertion (119-123)
    Domains in SCOPe 2.07: d1afd31, d1afd32
  • Heterogens: CA, CL, HOH

PDB Chain Sequences:

  • Chain '1':
    Sequence; same for both SEQRES and ATOM records: (download)
    >1afd1 (1:)
    aievklanmeaeintlkskleltnklhafsmgkksgkkffvtnhermpfskvkalcselr
    gtvaiprnaeenkaiqevaktsaflgitdevtegqfmyvtggrltysnwkkdqpddwygh
    glgggedcvtivdnglwndiscqashtavcefpa
    

  • Chain '2':
    Sequence; same for both SEQRES and ATOM records: (download)
    >1afd2 (2:)
    aievklanmeaeintlkskleltnklhafsmgkksgkkffvtnhermpfskvkalcselr
    gtvaiprnaeenkaiqevaktsaflgitdevtegqfmyvtggrltysnwkkdqpddwygh
    glgggedcvtivdnglwndiscqashtavcefpa
    

  • Chain '3':
    Sequence; same for both SEQRES and ATOM records: (download)
    >1afd3 (3:)
    aievklanmeaeintlkskleltnklhafsmgkksgkkffvtnhermpfskvkalcselr
    gtvaiprnaeenkaiqevaktsaflgitdevtegqfmyvtggrltysnwkkdqpddwygh
    glgggedcvtivdnglwndiscqashtavcefpa