SCOP 1.73: Structural Classification of Proteins

PDB entry 1abi

View 1abi on RCSB PDB site
Description: structure of the hirulog 3-thrombin complex and nature of the s' subsites of substrates and inhibitors
Class: hydrolase(serine proteinase)
Keywords: hydrolase(serine proteinase)
Deposited on 1992-08-24, released 1994-01-31
The last revision prior to the SCOP 1.73 freeze date was dated 2003-04-01, with a file datestamp of 2007-07-06.
Experiment type: -
Resolution: 2.3 Å
R-factor: 0.132
AEROSPACI score: 0.38 (click here for full SPACI score report)

Chains and heterogens:

Chain 'H':
Compound: alpha-thrombin (large subunit)
Species: HOMO SAPIENS
Database cross-references and differences (RAF-indexed):
- Uniprot P00734 (0-258)
Domains in SCOP 1.73: d1abi.1
Chain 'I':
Compound: hirulog 3
Species: Hirudo medicinalis
Chain 'L':
Compound: alpha-thrombin (small subunit)
Species: HOMO SAPIENS
Database cross-references and differences (RAF-indexed):
- Uniprot P00734 (Start-35)
Domains in SCOP 1.73: d1abi.1
Heterogens: HOH

PDB Chain Sequences:

Chain 'H':
Sequence, based on SEQRES records: (download)

>1abiH (H:)
ivegsdaeigmspwqvmlfrkspqellcgaslisdrwvltaahcllyppwdknftendll
vrigkhsrtryerniekismlekiyihprynwrenldrdialmklkkpvafsdyihpvcl
pdretaasllqagykgrvtgwgnlketwtanvgkgqpsvlqvvnlpiverpvckdstrir
itdnmfcagykpdegkrgdacegdsggpfvmkspfnnrwyqmgivswgegcdrdgkygfy
thvfrlkkwiqkvidqfge

Sequence, based on observed residues (ATOM records): (download)

>1abiH (H:)
ivegsdaeigmspwqvmlfrkspqellcgaslisdrwvltaahcllyppwdknftendll
vrigkhsrtryerniekismlekiyihprynwrenldrdialmklkkpvafsdyihpvcl
pdretaasllqagykgrvtgwgnlketgqpsvlqvvnlpiverpvckdstriritdnmfc
agykpdegkrgdacegdsggpfvmkspfnnrwyqmgivswgegcdrdgkygfythvfrlk
kwiqkvidqfge

Chain 'I':
No sequence available.
Chain 'L':
Sequence, based on SEQRES records: (download)
```
>1abiL (L:)
tfgsgeadcglrplfekksledkterellesyidgr
```
Sequence, based on observed residues (ATOM records): (download)
```
>1abiL (L:)
sgeadcglrplfekksledkterellesyidgr
```