PDB entry 1a4k

View 1a4k on RCSB PDB site
Description: diels alder catalytic antibody with transition state analogue
Class: immunoglobulin
Keywords: immunoglobulin, antibody, catalytic antibody, diels alder, germline
Deposited on 1998-01-30, released 1998-05-13
The last revision prior to the SCOPe 2.07 freeze date was dated 2009-02-24, with a file datestamp of 2009-03-01.
Experiment type: XRAY
Resolution: 2.4 Å
R-factor: 0.211
AEROSPACI score: 0.3 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: antibody fab
    Species: Mus musculus [TaxId:10090]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d1a4ka1, d1a4ka2
  • Chain 'B':
    Compound: antibody fab
    Species: Mus musculus [TaxId:10090]
    Database cross-references and differences (RAF-indexed):
    • PDB 1A4K (0-218)
    Domains in SCOPe 2.07: d1a4kb1, d1a4kb2
  • Chain 'H':
    Compound: antibody fab
    Species: Mus musculus [TaxId:10090]
    Database cross-references and differences (RAF-indexed):
    • PDB 1A4K (0-End)
    Domains in SCOPe 2.07: d1a4kh1, d1a4kh2
  • Chain 'L':
    Compound: antibody fab
    Species: Mus musculus [TaxId:10090]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d1a4kl1, d1a4kl2
  • Heterogens: CD, FRA, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download)
    >1a4kA (A:)
    elvmtqtplslpvslgdqasiscrssqsllhsngntylhwylqkpgqspklliykvsnrf
    sgvpdrfsgsgsgtdftlkisrveaedlgvyfcsqvthvpptfgggtkleikrtvaapsv
    fifppsdeqlksgtasvvcllnnfypreakvqwkvdnalqsgnsqesvteqdskdstysl
    sstltlskadyekhkvyacevthqglsspvtksfnrg
    

    Sequence, based on observed residues (ATOM records): (download)
    >1a4kA (A:)
    elvmtqtplslpvslgdqasiscrssqsllhsngntylhwylqkpgqspklliykvsnrf
    sgvpdrfsgsgsgtdftlkisrveaedlgvyfcsqvthvpptfgggtkleikrtvaapsv
    fifppsdeqlksgtasvvcllnnfypreakvqwkvdnalqsgnsqesvteqdskdstysl
    sstltlskadyekhkvyacevthqglsspvtksfnr
    

  • Chain 'B':
    Sequence; same for both SEQRES and ATOM records: (download)
    >1a4kB (B:)
    qvqllesgpelkkpgetvkisckasgytftnygmnwvkqapgkglkwmgwintytgepty
    addfkgrfafsletsastaylqinnlknedtatyfcvqaerlrrtfdywgagttvtvssa
    stkgpsvfplapsskstsggtaalgclvkdyfpepvtvswnsgaltsgvhtfpavlqssg
    lyslssvvtvpssslgtqtyicnvnhkpsntkvdkkvep
    

  • Chain 'H':
    Sequence, based on SEQRES records: (download)
    >1a4kH (H:)
    qvqllesgpelkkpgetvkisckasgytftnygmnwvkqapgkglkwmgwintytgepty
    addfkgrfafsletsastaylqinnlknedtatyfcvqaerlrrtfdywgagttvtvssa
    stkgpsvfplapsskstsggtaalgclvkdyfpepvtvswnsgaltsgvhtfpavlqssg
    lyslssvvtvpssslgtqtyicnvnhkpsntkvdkkvep
    

    Sequence, based on observed residues (ATOM records): (download)
    >1a4kH (H:)
    qvqllesgpelkkpgetvkisckasgytftnygmnwvkqapgkglkwmgwintytgepty
    addfkgrfafsletsastaylqinnlknedtatyfcvqaerlrrtfdywgagttvtvssa
    stkgpsvfplapsskstsggtaalgclvkdyfpepvtvswnsgaltsgvhtfpavlqssg
    lyslssvvtvpssslgtqtyicnvnhkpsntkvdkkv
    

  • Chain 'L':
    Sequence; same for both SEQRES and ATOM records: (download)
    >1a4kL (L:)
    elvmtqtplslpvslgdqasiscrssqsllhsngntylhwylqkpgqspklliykvsnrf
    sgvpdrfsgsgsgtdftlkisrveaedlgvyfcsqvthvpptfgggtkleikrtvaapsv
    fifppsdeqlksgtasvvcllnnfypreakvqwkvdnalqsgnsqesvteqdskdstysl
    sstltlskadyekhkvyacevthqglsspvtksfnrg