There are no known bugs in ASTRAL that have not been fixed.  Please
find some and report them.  See the comments file for more information.

The atom records for 1msh appear truncated at atom 65533, probably due
to integer overflow.

The entries 1pr8, 1uhq, and 1pr7 were released by the PDB in 2003, but
were later withdrawn and are currently annotated as "on hold."  They
are still classifed in SCOP, and their sequences are in ASTRAL, but
the PDB-style files are not available in this release.

There are some bugs in the underlying PDB files which we do not attempt
to fix; we have identified files with missing residues in the SEQRES
records (which were present in the ATOM records), and cases where the
residues in the SEQRES and ATOM fields do not match.  These are lists
of those PDB chains and domains which appear in our sequence sets.

Domains with mismatches between SEQRES and ATOM records (cases where
a coordinates for a residue are given in the ATOM records, but the
SEQRES records indicate a different residue should appear at that position:
d1a37a_ k 212 -> d
d1a37b_ k 212 -> d
d1a6ya_ h 116 -> l
d1a6yb_ h 116 -> l
d1al4a_ v 1A -> i
d1al4a_ x 1 -> v
d1al4b_ v 1A -> i
d1al4b_ x 1 -> v
d1alza_ v 1A -> i
d1alza_ x 1 -> v
d1b8mb_ e 68 -> a
d1bccb1 q 305 -> n
d1bccb2 q 305 -> n
d1bg3a1 l 911 -> a
d1bg3a2 l 911 -> a
d1bg3a3 l 911 -> a
d1bg3a4 l 911 -> a
d1bsfa_ a 28 -> r
d1bsfb_ a 28 -> r
d1buab_ q 224 -> n
d1bxka_ r 350 -> g
d1d2qa_ e 263 -> a
d1d2qa_ l 265 -> a
d1d2qa_ n 140 -> a
d1d2qa_ p 139 -> a
d1dd7a_ y 445 -> a
d1e5ra_ q 67 -> a
d1e9yb1 l 324 -> k
d1e9yb1 l 324 -> k
d1e9yb2 l 324 -> k
d1e9yb2 l 324 -> k
d1fna__ d 7 -> s
d1fna__ r 6 -> g
d1gtl1_ a 357 -> p
d1gtl1_ s 353 -> q
d1gtl2_ a 357 -> p
d1gtl2_ s 353 -> q
d1h76a1 e 342 -> i
d1h76a2 e 342 -> i
d1haxb_ r 131 -> a
d1hayb_ r 131 -> a
d1hb0b_ r 131 -> a
d1hra__ p 1 -> m
d1i3sa_ m 86 -> h
d1jdfa1 q 229 -> a
d1jdfa2 q 229 -> a
d1jdfb1 d 169 -> a
d1jdfb1 e 214 -> a
d1jdfb1 e 412 -> a
d1jdfb1 k 158 -> a
d1jdfb1 k 386 -> a
d1jdfb1 k 60 -> a
d1jdfb1 r 190 -> a
d1jdfb2 d 169 -> a
d1jdfb2 e 214 -> a
d1jdfb2 e 412 -> a
d1jdfb2 k 158 -> a
d1jdfb2 k 386 -> a
d1jdfb2 k 60 -> a
d1jdfb2 r 190 -> a
d1jdfc1 e 214 -> a
d1jdfc1 k 361 -> a
d1jdfc2 e 214 -> a
d1jdfc2 k 361 -> a
d1jdfd1 e 214 -> a
d1jdfd1 e 412 -> a
d1jdfd1 k 361 -> a
d1jdfd1 s 47 -> a
d1jdfd1 t 6 -> a
d1jdfd2 e 214 -> a
d1jdfd2 e 412 -> a
d1jdfd2 k 361 -> a
d1jdfd2 s 47 -> a
d1jdfd2 t 6 -> a
d1l3aa_ a 166 -> t
d1l3ab_ a 166 -> t
d1l3ac_ a 166 -> t
d1l3ad_ a 166 -> t
d1mcba2 e 1 -> p
d1mcbb2 e 1 -> p
d1mcca2 e 1 -> p
d1mccb2 e 1 -> p
d1mcda2 e 1 -> p
d1mcdb2 e 1 -> p
d1mcea2 e 1 -> p
d1mceb2 e 1 -> p
d1mcfa2 e 1 -> p
d1mcfb2 e 1 -> p
d1mcha2 e 1 -> p
d1mchb2 e 1 -> p
d1mcia2 e 1 -> p
d1mcib2 e 1 -> p
d1mcja2 e 1 -> p
d1mcjb2 e 1 -> p
d1mcka2 e 1 -> p
d1mckb2 e 1 -> p
d1mcla2 e 1 -> p
d1mclb2 e 1 -> p
d1mcna2 e 1 -> p
d1mcnb2 e 1 -> p
d1mcqa2 e 1 -> p
d1mcqb2 e 1 -> p
d1mcra2 e 1 -> p
d1mcrb2 e 1 -> p
d1mcsa2 e 1 -> p
d1mcsb2 e 1 -> p
d1mioa_ s 426 -> a
d1nfie_ c 206 -> g
d1nfie_ n 249 -> q
d1nfif_ c 206 -> g
d1nfif_ n 249 -> q
d1pda_1 a 241 -> g
d1pda_1 g 261 -> a
d1pda_2 a 241 -> g
d1pda_2 g 261 -> a
d1s01__ a 182 -> s
d1s01__ a 89 -> s
d1s01__ a 99 -> d
d1s01__ d 61 -> n
d1s01__ d 98 -> a
d1s01__ g 169 -> a
d1s01__ n 57 -> p
d1s01__ p 56 -> n
d1s01__ q 251 -> e
d1s01__ s 158 -> t
d1s01__ s 88 -> a
d1s01__ t 159 -> s
d1shkb_ a 112 -> q
d1shkb_ a 126 -> r
d1tbpa2 s 61 -> m
d1tbpb2 s 61 -> m
d1tnfa_ d 143 -> l
d1tnfb_ d 143 -> l
d1tnfc_ d 143 -> l
d1tx4b_ a 51 -> k
d1uyia_ e 16 -> h
d1vyva1 g 168 -> k
d1vyva1 r 167 -> g
d1vyva2 g 168 -> k
d1vyva2 r 167 -> g
d1vyvb1 g 168 -> k
d1vyvb1 r 167 -> g
d1vyvb2 g 168 -> k
d1vyvb2 r 167 -> g
d1x11a_ d 451 -> r
d1ysac_ s 225 -> k
d1ysad_ s 224 -> m
d1ysad_ s 225 -> k
d2at1b1 n 104 -> d
d2at1b2 n 104 -> d
d2at1d1 n 104 -> d
d2at1d2 n 104 -> d
d2bce__ n 187 -> q
d2bce__ n 361 -> q
d2fam__ k 146 -> a
d2glsa1 p 447 -> r
d2glsa2 p 447 -> r
d2glsb1 p 447 -> r
d2glsb2 p 447 -> r
d2glsc1 p 447 -> r
d2glsc2 p 447 -> r
d2glsd1 p 447 -> r
d2glsd2 p 447 -> r
d2glse1 p 447 -> r
d2glse2 p 447 -> r
d2glsf1 p 447 -> r
d2glsf2 p 447 -> r
d2glsg1 p 447 -> r
d2glsg2 p 447 -> r
d2glsh1 p 447 -> r
d2glsh2 p 447 -> r
d2glsi1 p 447 -> r
d2glsi2 p 447 -> r
d2glsj1 p 447 -> r
d2glsj2 p 447 -> r
d2glsk1 p 447 -> r
d2glsk2 p 447 -> r
d2glsl1 p 447 -> r
d2glsl2 p 447 -> r
d2pf2_1 e 16 -> r
d2pf2_1 r 15 -> e
d2pf2_2 e 16 -> r
d2pf2_2 r 15 -> e
d2pfkc_ s 145 -> t
d2pfkc_ t 144 -> s
d2pfkd_ s 145 -> t
d2pfkd_ t 144 -> s
d2plv1_ i 10 -> t
d2plv1_ l 7 -> s
d2plv1_ m 9 -> s
d2shkb_ a 112 -> q
d3at1b1 n 104 -> d
d3at1b2 n 104 -> d
d3at1d1 n 104 -> d
d3at1d2 n 104 -> d
d3bccb1 q 305 -> n
d3bccb2 q 305 -> n
d3gbp__ q 25 -> e
d3hvtb_ k 277 -> r
d4at1b1 n 104 -> d
d4at1b2 n 104 -> d
d4at1d1 n 104 -> d
d4at1d2 n 104 -> d
d4ccp__ d 272 -> n
d4icd__ e 331 -> q
d5csca_ l 77 -> a
d5cscb_ l 77 -> a
d6at1b1 n 104 -> d
d6at1b2 n 104 -> d
d6at1d1 n 104 -> d
d6at1d2 n 104 -> d
d7at1b1 n 104 -> d
d7at1b2 n 104 -> d
d7at1d1 n 104 -> d
d7at1d2 n 104 -> d
d8atcb1 n 104 -> d
d8atcb2 n 104 -> d
d8atcd1 n 104 -> d
d8atcd2 n 104 -> d
d8gpb__ i 841 -> a
d8gpb__ k 840 -> a


Domains with missing SEQRES records (cases where coordinates for a
residue are given in the ATOM records, but the residue is not included
in the SEQRES records):
d1alxa_
d1alza_
d1fcs__
d1hhka1
d1hhka2
d1ifa__
d1ls3a_
d1ls3c_
d1lta.1
d1ltb.1
d1mdc__
d1sosa_
d1sosb_
d1sosc_
d1sosd_
d1sose_
d1sosf_
d1sosg_
d1sosh_
d1sosi_
d1sosj_
d3hhrc1
d3hhrc2
d9pti__


PDB chains with mismatches between SEQRES and ATOM records:
1a37A k 212 -> d
1a37B k 212 -> d
1a6yA h 116 -> l
1a6yB h 116 -> l
1al4A v 1A -> i
1al4A x 1 -> v
1al4B v 1A -> i
1al4B x 1 -> v
1alzA v 1A -> i
1alzA x 1 -> v
1b8mB e 68 -> a
1bccB q 305 -> n
1bg3A l 911 -> a
1bsfA a 28 -> r
1bsfB a 28 -> r
1buaB q 224 -> n
1bxkA r 350 -> g
1d2qA e 263 -> a
1d2qA l 265 -> a
1d2qA n 140 -> a
1d2qA p 139 -> a
1dd7A y 445 -> a
1e5rA q 67 -> a
1e9yB l 324 -> k
1fna_ d 7 -> s
1fna_ r 6 -> g
1gtl1 a 357 -> p
1gtl1 s 353 -> q
1gtl2 a 357 -> p
1gtl2 s 353 -> q
1h76A e 342 -> i
1haxB r 131 -> a
1hayB r 131 -> a
1hb0B r 131 -> a
1hra_ p 1 -> m
1i3sA m 86 -> h
1jdfA q 229 -> a
1jdfB d 169 -> a
1jdfB e 214 -> a
1jdfB e 412 -> a
1jdfB k 158 -> a
1jdfB k 386 -> a
1jdfB k 60 -> a
1jdfB r 190 -> a
1jdfC e 214 -> a
1jdfC k 361 -> a
1jdfD e 214 -> a
1jdfD e 412 -> a
1jdfD k 361 -> a
1jdfD s 47 -> a
1jdfD t 6 -> a
1l3aA a 166 -> t
1l3aB a 166 -> t
1l3aC a 166 -> t
1l3aD a 166 -> t
1mcbA e 1 -> p
1mcbB e 1 -> p
1mccA e 1 -> p
1mccB e 1 -> p
1mcdA e 1 -> p
1mcdB e 1 -> p
1mceA e 1 -> p
1mceB e 1 -> p
1mcfA e 1 -> p
1mcfB e 1 -> p
1mchA e 1 -> p
1mchB e 1 -> p
1mciA e 1 -> p
1mciB e 1 -> p
1mcjA e 1 -> p
1mcjB e 1 -> p
1mckA e 1 -> p
1mckB e 1 -> p
1mclA e 1 -> p
1mclB e 1 -> p
1mcnA e 1 -> p
1mcnB e 1 -> p
1mcqA e 1 -> p
1mcqB e 1 -> p
1mcrA e 1 -> p
1mcrB e 1 -> p
1mcsA e 1 -> p
1mcsB e 1 -> p
1mioA s 426 -> a
1nfiE c 206 -> g
1nfiE n 249 -> q
1nfiF c 206 -> g
1nfiF n 249 -> q
1pda_ a 241 -> g
1pda_ g 261 -> a
1s01_ a 182 -> s
1s01_ a 89 -> s
1s01_ a 99 -> d
1s01_ d 61 -> n
1s01_ d 98 -> a
1s01_ g 169 -> a
1s01_ n 57 -> p
1s01_ p 56 -> n
1s01_ q 251 -> e
1s01_ s 158 -> t
1s01_ s 88 -> a
1s01_ t 159 -> s
1shkB a 112 -> q
1shkB a 126 -> r
1tbpA s 61 -> m
1tbpB s 61 -> m
1tnfA d 143 -> l
1tnfB d 143 -> l
1tnfC d 143 -> l
1tx4B a 51 -> k
1uyiA e 16 -> h
1vyvA g 168 -> k
1vyvA r 167 -> g
1vyvB g 168 -> k
1vyvB r 167 -> g
1x11A d 451 -> r
1ysaC s 225 -> k
1ysaD s 224 -> m
1ysaD s 225 -> k
2at1B n 104 -> d
2at1D n 104 -> d
2bce_ n 187 -> q
2bce_ n 361 -> q
2fam_ k 146 -> a
2glsA p 447 -> r
2glsB p 447 -> r
2glsC p 447 -> r
2glsD p 447 -> r
2glsE p 447 -> r
2glsF p 447 -> r
2glsG p 447 -> r
2glsH p 447 -> r
2glsI p 447 -> r
2glsJ p 447 -> r
2glsK p 447 -> r
2glsL p 447 -> r
2pf2_ e 16 -> r
2pf2_ r 15 -> e
2pfkC s 145 -> t
2pfkC t 144 -> s
2pfkD s 145 -> t
2pfkD t 144 -> s
2plv1 i 10 -> t
2plv1 l 7 -> s
2plv1 m 9 -> s
2shkB a 112 -> q
3at1B n 104 -> d
3at1D n 104 -> d
3bccB q 305 -> n
3gbp_ q 25 -> e
3hvtB k 277 -> r
4at1B n 104 -> d
4at1D n 104 -> d
4ccp_ d 272 -> n
4icd_ e 331 -> q
5cscA l 77 -> a
5cscB l 77 -> a
6at1B n 104 -> d
6at1D n 104 -> d
7at1B n 104 -> d
7at1D n 104 -> d
8atcB n 104 -> d
8atcD n 104 -> d
8gpb_ i 841 -> a
8gpb_ k 840 -> a

PDB chains with missing SEQRES records:
1alxA
1alzA
1fcs_
1hhkA
1ifa_
1ls3A
1ls3C
1ltaC
1ltbC
1mdc_
1sosA
1sosB
1sosC
1sosD
1sosE
1sosF
1sosG
1sosH
1sosI
1sosJ
3hhrC
9pti_