SPACI score report for 1y08 in ASTRAL 2.08:

PDB Entry: 1y08
SPACI score: 0.47
AEROSPACI score: 0.47

Experiment type: XRAY
Resolution: 1.93
R-factor: 0.196
PCK1 PROCHECK Ramachandran: 1
PCK2 PROCHECK Chi-1 angle: 1
PCK3 PROCHECK H-bonds: 2
WCK1 WHAT_CHECK Packing: -1.576
WCK2 WHAT_CHECK Ramachandran: -0.283
WCK3 WHAT_CHECK Chi angles: 0.108
WCK4 WHAT_CHECK Backbone: 0.723

Note: Here are links to pages about PROCHECK and WHAT_CHECK.

Here is the full WHAT_CHECK report on this protein (linked from the WHAT_CHECK site).