SPACI score report for 1yhq in ASTRAL 2.07:

PDB Entry: 1yhq
SPACI score: 0.35
AEROSPACI score: 0.35

Experiment type: XRAY
Resolution: 2.4
R-factor: 0.19
PCK1 PROCHECK Ramachandran: 1
PCK2 PROCHECK Chi-1 angle: 2
PCK3 PROCHECK H-bonds: 2
WCK1 WHAT_CHECK Packing: -3.643
WCK2 WHAT_CHECK Ramachandran: -2.335
WCK3 WHAT_CHECK Chi angles: -1.031
WCK4 WHAT_CHECK Backbone: 2.334

Note: Here are links to pages about PROCHECK and WHAT_CHECK.

Here is the full WHAT_CHECK report on this protein (linked from the WHAT_CHECK site).