SPACI score report for 1y1e in ASTRAL 2.07:

PDB Entry: 1y1e
SPACI score: 0.53
AEROSPACI score: 0.53

Experiment type: XRAY
Resolution: 1.73
R-factor: 0.196
PCK1 PROCHECK Ramachandran: 1
PCK2 PROCHECK Chi-1 angle: 1
PCK3 PROCHECK H-bonds: 2
WCK1 WHAT_CHECK Packing: -1.876
WCK2 WHAT_CHECK Ramachandran: -0.301
WCK3 WHAT_CHECK Chi angles: -0.237
WCK4 WHAT_CHECK Backbone: 1.637

Note: Here are links to pages about PROCHECK and WHAT_CHECK.

Here is the full WHAT_CHECK report on this protein (linked from the WHAT_CHECK site).