SPACI score report for 3d5y in ASTRAL 2.05:

PDB Entry: 3d5y
SPACI score: 0.8
AEROSPACI score: 0.8

Experiment type: XRAY
Resolution: 1.22
R-factor: 0.158
PCK1 PROCHECK Ramachandran: 1
PCK2 PROCHECK Chi-1 angle: 1
PCK3 PROCHECK H-bonds: 2
WCK1 WHAT_CHECK Packing: -1.501
WCK2 WHAT_CHECK Ramachandran: -1.205
WCK3 WHAT_CHECK Chi angles: 0.194
WCK4 WHAT_CHECK Backbone: -1.474

Note: Here are links to pages about PROCHECK and WHAT_CHECK.

Here is the full WHAT_CHECK report on this protein (linked from the WHAT_CHECK site).