SPACI score report for 1yjg in ASTRAL 2.05:

PDB Entry: 1yjg
SPACI score: 0.38
AEROSPACI score: 0.38

Experiment type: XRAY
Resolution: 2.22
R-factor: 0.209
PCK1 PROCHECK Ramachandran: 1
PCK2 PROCHECK Chi-1 angle: 2
PCK3 PROCHECK H-bonds: 1
WCK1 WHAT_CHECK Packing: 0.405
WCK2 WHAT_CHECK Ramachandran: -1.133
WCK3 WHAT_CHECK Chi angles: -3.595
WCK4 WHAT_CHECK Backbone: 4.049

Note: Here are links to pages about PROCHECK and WHAT_CHECK.

Here is the full WHAT_CHECK report on this protein (linked from the WHAT_CHECK site).