SPACI score report for 3nn9 in ASTRAL 1.55:

WARNING! The SPACI score for this entry is not valid. This is not an X-ray structure, so the resolution and R-factor listed may be arbitrary and not valid.

PDB Entry: 3nn9
SPACI score: 0.38 (not valid)
AEROSPACI score: 0.38 (not valid)

Experiment type: -
Resolution: 2.3
R-factor: 0.178
PCK1 PROCHECK Ramachandran: 1
PCK2 PROCHECK Chi-1 angle: 2
PCK3 PROCHECK H-bonds: 2
WCK1 WHAT_CHECK Packing: 1.945
WCK2 WHAT_CHECK Ramachandran: -1.417
WCK3 WHAT_CHECK Chi angles: -0.811
WCK4 WHAT_CHECK Backbone: 0.357

Note: Here are links to pages about PROCHECK and WHAT_CHECK.

Here is the full WHAT_CHECK report on this protein (linked from the WHAT_CHECK site).