SCOP: Structural Classification of Proteins and ASTRAL

Structural Classification of Proteins and ASTRAL release 1.75B (January 2013)

Most commonly requested files:

Astral SCOP 1.75B genetic domain sequence subsets, based on PDB SEQRES records,
with less than 40% identity to each other: download sequences (3 MB)
Astral SCOP 1.75B genetic domain sequence subsets, based on PDB SEQRES records,
with less than 95% identity to each other: download sequences (5.1 MB)

Other Astral resources:

SCOP 1.75B Sequence Resources
- Release notes
- SCOP domain sequences, ATOM-based
- SCOP domain sequences, SEQRES-based
- SCOP domain subsets, based on:
  - percentage identity
  - E-value
  - SCOP classification
- original-style domain sequences and subsets
- Retrieve sequences for individual SCOP domains and PDB chains (one at a time)
- Other sequences and subsets
- Sequences added since the 1.75B release; last updated on 2013-04-25.
- Pdb-style files with coordinates for each SCOP domain
Spaci (Summary PDB ASTRAL Check Index) scores, and AEROSPACI scores
Pdb ATOM—SEQRES correspondence maps in Rapid Access Format.

Other Astral versions based on stable SCOP identifiers:

Astral 1.75B (January 2013); release notes for 1.75B
Astral 1.75A (March 2012); release notes for 1.75A
Astral 1.75 (June 2009); release notes for 1.75
Astral 1.73 (November 2007); release notes for 1.73
Astral 1.71 (October 2006); release notes for 1.71
Astral 1.69 (July 2005); release notes for 1.69
Astral 1.67 (February 2005); release notes for 1.67
Astral 1.65 (December 2003); release notes for 1.65
Astral 1.63 (June 2003); release notes for 1.63
Astral 1.61 (November 2002); release notes for 1.61
Astral 1.59 (May 2002); release notes for 1.59
Astral 1.57 (January 2002); release notes for 1.57
Astral 1.55 (July 2001); release notes for 1.55

Older Astral versions not based on stable SCOP identifiers:

Copyright © 1994-2013 The SCOP and Astral authors
scop@mrc-lmb.cam.ac.uk and astral@compbio.berkeley.edu